Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803306.1_cds_XP_016483688.1_7465
CDS Infomation

[gene=LOC107804325] [db_xref=GeneID:107804325] [protein=xylem cysteine proteinase 1-like] [protein_id=XP_016483688.1] [location=join(7481..7949,8020..8255,8518..8658,8831..9046)] [gbkey=CDS]
Sequence

ATGGCTTCATTCTCTTTTTCCAAGTTGTCATTTCTTGCCTTGTTTTCCATATTATCTCTC
GTGGCATGCACAACGTTTGCTCGCGATTTTTCCATCGTGGGATATTCCCCCGATGACTTG
AACAGCATCGAAAACCTCATCAATCTCTTCGAATCGTGGATGGAGAAACACAGCAAGATT
TATGAGAGCATCGAAGAGAAGTTGCATAGGTTTGAGATTTTCAGAGACAATTTGAAACAC
ATTGATGAGAGGAATAAGTTGGTTAGTAACTATTGGCTTGGTTTGAATGAATTTGCTGAT
TTGAGCCATGATGAGTTCAAGAAGATGTATCTAGGACTCCAAGTTCAACATGAGAGATCA
GAATCCTCTCCACAAGAATTCACCTATAGAGATTTTGTGGATTTGCCCAAGTCTATTGAC
TGGAGAAAGAAAGGTGCTGTGACTAATGTCAAGAACCAGGGCTCATGTGGTAGTTGCTGG
GCATTTTCAACAGTAGCGGCAGTAGAGGGAATAAACCAAATAAAGACAGGAAATTTGACA
TCCTTATCTGAACAAGAGCTCATCGACTGTGACACAAAATATAACAGTGGTTGCAATGGA
GGCCTTATGGATTATGCTTTTCAATTTATTGTCTCCCAACGTGGTCTTCACAAGGAGGAT
GACTATCCTTATCTCATGGAGGAAGGCACTTGTGATGAAAAGAGAGATGAAACTGAAGTG
GTGACAATTGATGGATACCGTGATGTACCAGCCAATGACGAACAAAGTCTGTTGAAAGCT
CTTGCAAACCAACCTGTGAGTGTGGCCATTGAGGCTTCTGGTAGAGATTTCCAGTTCTAC
AGTGGGGGTGTGTTTGACGGGCATTGTGGAAGTGCATTGGATCATGGAGTGGCAGCAGTT
GGATATGGATCCACAAAGGGGATGGACTACATCATTGTCAAGAACTCTTGGGGTCCCAAA
TGGGGAGAAAAGGGTTTCATTAGGATGAAGAGAAACACCGCCAAGCCTGCAGGAATCTGT
GGAATCAACAAAATGGCTTCTTTCCCTATCAAAAAGAAGTGA

Peptide Sequence

PEP ID

XP_016483688.1
PEP Infomation

PREDICTED: xylem cysteine proteinase 1-like [Nicotiana tabacum]
Sequence

MASFSFSKLSFLALFSILSLVACTTFARDFSIVGYSPDDLNSIENLINLFESWMEKHSKI
YESIEEKLHRFEIFRDNLKHIDERNKLVSNYWLGLNEFADLSHDEFKKMYLGLQVQHERS
ESSPQEFTYRDFVDLPKSIDWRKKGAVTNVKNQGSCGSCWAFSTVAAVEGINQIKTGNLT
SLSEQELIDCDTKYNSGCNGGLMDYAFQFIVSQRGLHKEDDYPYLMEEGTCDEKRDETEV
VTIDGYRDVPANDEQSLLKALANQPVSVAIEASGRDFQFYSGGVFDGHCGSALDHGVAAV
GYGSTKGMDYIIVKNSWGPKWGEKGFIRMKRNTAKPAGICGINKMASFPIKKK

Transcript Sequence

Gene sequence data has not been registered.